PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024988733.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 196aa MW: 21969.2 Da PI: 7.395

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024988733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.5	6.2e-33	43	97	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl XP_024988733.1 43 KPRLRWTADLHDRFVDAVSQLGGPSKATPKAIMRAMGVKGLTLFHLKSHLQKYRL 97 79****************************************************8 PP
2	Myb_DNA-binding	65.7	8.2e-21	45	96	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav qlGg+ t+k+I+r mg kg+tl ++ks++qky+ XP_024988733.1 45 RLRWTADLHDRFVDAVSQLGGPskaTPKAIMRAMGvKGLTLFHLKSHLQKYR 96 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MYHHHSSRLI QPGEACIDVA SLHRAIGVGL GGDPCLLLTS DPKPRLRWTA DLHDRFVDAV 60 SQLGGPSKAT PKAIMRAMGV KGLTLFHLKS HLQKYRLGLY HMESPQVMCS SQSLETTHVN 120 EGYEVKEALR AQMEVESRLH LQVEAEKHLQ KHQDAEKRYL IMLEKACKML ADQIIGSEEM 180 NGSQTEYAEA EKRSGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	6e-57	G2-like family protein