PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988734.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 178aa    MW: 19823.8 Da    PI: 9.3371
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.85.1e-334397155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprlrWt +LH+rFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  XP_024988734.1 43 KPRLRWTADLHDRFVDAVSQLGGPSKATPKAIMRAMGVKGLTLFHLKSHLQKYRL 97
                    79****************************************************8 PP
2Myb_DNA-binding666.9e-214596148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT+++++++vdav qlGg+   t+k+I+r mg kg+tl ++ks++qky+
   XP_024988734.1 45 RLRWTADLHDRFVDAVSQLGGPskaTPKAIMRAMGvKGLTLFHLKSHLQKYR 96
                     89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MYHHHSSRLI QPGEACIDVA SLHRAIGVGL GGDPCLLLTS DPKPRLRWTA DLHDRFVDAV  60
SQLGGPSKAT PKAIMRAMGV KGLTLFHLKS HLQKYRLGKQ SGKGLCEPNN DGLSGLYHME  120
SPQVMCSSQS LETTHVNEGY EVKEALRAQM EVESRLHLQV ECRLRNTCRN TRMQRKGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.13e-55G2-like family protein