PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024988736.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 269aa MW: 31605.4 Da PI: 6.5136

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024988736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.7	6.9e-15	147	204	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +++rr+++NRe+ArrsR RK+++++eL + v L +eN+ L+++l++ +++ +++ +e XP_024988736.1 147 RKQRRMISNRESARRSRMRKQKQLDELCTQVMRLRNENQGLIEKLNHFSENHEQVIQE 204 689**********************************************999987666 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MLFPSPIKPS FNSFLIHSIL ILLNIITLIY IQTYVFTYNI FDWFFLGKRD RFENYIYRER 60 EMAGNYYLAP EYEDLSCNFP TNFTSSQNDN MPSSLHFVTN LPYYHQPSSH PQMPMVDFYP 120 QSSSLSYNNS STSDEADENQ MSIINERKQR RMISNRESAR RSRMRKQKQL DELCTQVMRL 180 RNENQGLIEK LNHFSENHEQ VIQENDRLKK ETTELRQLLS EAQLASTYTT LRDLDDDHEA 240 GLVPSCTTAY LRAQSSTKST TKNSSNLLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	167	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	2e-36	bZIP family protein