PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988792.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family Dof
Protein Properties Length: 307aa    MW: 33470 Da    PI: 8.7379
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1244.7e-392483362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    + +lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++
  XP_024988792.1 24 QPILKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRTK 83
                    6789*****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MASAARITEK PIAHQNQQQQ QRQQPILKCP RCDSSNTKFC YYNNYSLSQP RHFCKACKRY  60
WTRGGTLRNV PVGGGCRKNK RTKRILTTTI TTSHAATTSV TVGHHPNPTS NPNLDHIASS  120
THPDNNFNPL FGLSEQNSKY PTFDTRVSHI TDTDVTKYNR LHPHMSAFGL GFSSPDPGAT  180
VVANHAHDSI SLVSSYSSMI GGGATSTCTT NPMMASFLAS SLQHQPRFLG FAPYGDGGGS  240
AVNDAQMAGT KSRMDWNNHF DGQNHNDQIK AVESSDPTFL WNTSTGGDGG EWFDPTSNIC  300
SSVPSLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.26e-32Dof family protein