PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024989054.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 234aa MW: 26785.9 Da PI: 7.3911

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024989054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	108.9	2.5e-34	18	73	4	59
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 + l+cprC+stntkfCyynny+ +qPryfCkaC+r+WtkGG+lr vP+Gggr++++ XP_024989054.1 18 DPLNCPRCESTNTKFCYYNNYNKTQPRYFCKACKRHWTKGGTLRTVPIGGGRKNKR 73 6789**********************************************976554 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MLRSGGSMVQ NPGSSQPDPL NCPRCESTNT KFCYYNNYNK TQPRYFCKAC KRHWTKGGTL 60 RTVPIGGGRK NKRLRRPTRA TITATTAARI INNPSKDQKN SLLPLDADHK VSFFKPITDS 120 DRRDDEELYT NIEELKGLVS WDFYGGFIGC TMMQQSLDHG DDHHPILGFS KLSDANPSSR 180 SLLEKMENDE DSTVTPRSNL LEQSNCNWNW NWNDLDTMVL EDLNKPWEDP EFKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-28	Dof family protein