PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024989105.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 269aa MW: 30583.5 Da PI: 8.1994

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024989105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.4	6.6e-33	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+a++ LGG++kAtPk +l++m+vkgLt++hvkSHLQ+YR+ XP_024989105.1 19 PRLRWTPDLHRCFVHAIHTLGGPHKATPKLVLQMMDVKGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	51.6	2.2e-16	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+a++ lGg+ t+k++ ++m kg+t ++ks++q+y+ XP_024989105.1 20 RLRWTPDLHRCFVHAIHTLGGPhkaTPKLVLQMMDvKGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MGGCERNGTV RQYIRSKVPR LRWTPDLHRC FVHAIHTLGG PHKATPKLVL QMMDVKGLTI 60 SHVKSHLQMY RSMKGDVNNQ DDEAHKSGGL QKRSIEDQHD GCIDHEIYLH PSIQESNPHF 120 IYDPFSVPCK RGRMEITGMH GFSERRIKGK EGIGDHKWQQ PHSFSIPHFH FNPSFTHKIK 180 SDFLKISKLE NGGWFDGMEL EKPRNIEEDV DERAGGLSLS LSLHQPLVQR SSNGSSMSEI 240 SETQSRHNSI DHSSNKCSVN LDLSIGLCY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	3e-33	G2-like family protein