PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024989243.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 287aa MW: 30862.3 Da PI: 9.198

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024989243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	109.4	1.8e-34	27	80	7	60
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC s+ tkfCyynnys+sqPryfCk CrryWt+GGalrn+P Gg++rk+ + XP_024989243.1 27 SCPRCSSDRTKFCYYNNYSVSQPRYFCKDCRRYWTHGGALRNIPSGGTSRKRGR 80 7*************************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MNPKDVGRQS HQLLNHPRAP PSIPPPSCPR CSSDRTKFCY YNNYSVSQPR YFCKDCRRYW 60 THGGALRNIP SGGTSRKRGR TDVASSSSQI LQSPSSRNLL PSPPPPPPPL AWSLGSSPDN 120 TSGTAVARSS IGRGTFRPPV TETMQYFNGG GFVNQTPFKF SPGGDQLGGV NTAFGAVSMG 180 FGGGDPSPPP VPSTQSLPQF SPLDNFLDVG FPFLQRPPQH PPPPTVLGSQ NMGLNNARTT 240 ITGSNYFQSV ARDATAAAHV VSIDEWSELN DMDNEGDPFQ SYKPPSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21050.1	2e-23	Dof family protein