PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024989289.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 188aa MW: 20570.7 Da PI: 6.6256

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024989289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.2	2.8e-26	58	107	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrW++eLH++F +ave+LGG+e+AtPk +l++m+vkg++++h+kSHLQ XP_024989289.1 58 PRLRWSTELHRCFENAVERLGGAERATPKMVLQMMNVKGVSISHIKSHLQ 107 8************************************************* PP
2	Myb_DNA-binding	39.8	1e-12	59	107	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rW+te++ + +av++lGg t+k + ++m+ kg + ++ks++q XP_024989289.1 59 RLRWSTELHRCFENAVERLGGAeraTPKMVLQMMNvKGVSISHIKSHLQ 107 89****************99************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MKRLECEFSK KGSSSSLETM KDSADEQLKV SRQRLDGNSS KNSSNKSINQ THDHPKVPRL 60 RWSTELHRCF ENAVERLGGA ERATPKMVLQ MMNVKGVSIS HIKSHLQEDS DCNGEENGDA 120 IAKIAYKDFF NTGFTSYDHV SDDDVIASSS SNDKGSKTES STLEGPHASS VKASCVDGKN 180 VSLDLTLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-24	G2-like family protein