PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024989506.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 268aa    MW: 29568.9 Da    PI: 7.9443
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024989506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-182776255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  XP_024989506.1 27 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 76
                    799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEIQFQQQPR VLKPSKGRGK NSSNNNKFVG VRQRPSGRWV AEIKDTTQKI RMWLGTFETA  60
EEAARAYDEA ACLLRGSNTR TNFITHVSHN SPLASRIRNL LNTKKTPKKR NQDSSIPSVS  120
VTSCNTTPSV TNVGVSTSDS NSISTSTSTS SSSSNSGGSG DSLSSGAKLE DNLSKLFDDA  180
YKPDLSNMSW GFEDHRYASS QTMVELPKNV VLSEMGLVTE FSEFERMKVE RQISASLYAM  240
NGVQEYIETV NDPNEAIWDL PPLCSLFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-31ERF family protein