PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024990287.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 324aa    MW: 35743.7 Da    PI: 5.0862
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024990287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH505.2e-164493255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  XP_024990287.1 44 RSKHSVTEQRRRSKINERFQILRDLIPNS----DQKRDTASFLLEVIEYVQYLQ 93
                    899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MKSSKGHQED EEEDYEDFGA KKDNTASSNT SKDGKSSDKA NATRSKHSVT EQRRRSKINE  60
RFQILRDLIP NSDQKRDTAS FLLEVIEYVQ YLQEKVHKYE GSYQGWNAEP TKLMPWRNSH  120
WRVPNFGQPP VLKSDSGQAP SFPVRFDENV SVAPAVNTTT PQNPVSGDVN CNLMDSQPEL  180
LASKTTVMPM PMPMPMPMPM PLPIPVQASM PVPIQQQLDG AFSHPTTLQG SVCNVQSTDG  240
DANQQEELTV EGGTISISSV YSQGLLNSLT QALQNSGVDL SQATISVQVD LGKRANRGIG  300
KDEQEEFSNG DKSSSDQAQK RLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-95bHLH family protein