PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024990725.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 268aa    MW: 30422 Da    PI: 4.799
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024990725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.6e-20100151156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++++GVr+++ +grW+AeI+dp +   + r +lg+++taeeAa+ +++a+ kl+g+
  XP_024990725.1 100 KKFRGVRQRP-WGRWAAEIMDPAT---CVRLWLGTYDTAEEAAEVYDNAAIKLRGP 151
                     59********.**********854...7*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEVPVMSEKF SGQENSPCPR LIRISITDPY ATDSSGDEDD EHYGQWHVKK YVNEINIKKS  60
SKTTMMPVNG KMTTTRNKPS ALEMKYNAMK KKRTPAGNVK KFRGVRQRPW GRWAAEIMDP  120
ATCVRLWLGT YDTAEEAAEV YDNAAIKLRG PDAVTNFIVP PVLENPSLAN VTSMSDHYSN  180
LKSQKLPLAD APPFEYQSFD PIQFGDEVPY FNMHDDFGSI YPNQFDNFGT IPFVDDFNPD  240
TGRGSPSTLQ IENYFEDISD SSFYSWFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.18e-42ERF family protein