PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024990849.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family DBB
Protein Properties Length: 210aa    MW: 23140 Da    PI: 6.8995
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024990849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.72.1e-07433534
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                     C+ +e+  ++lfC  ++  lC+ C ++ H
  XP_024990849.1  4 LCDVCERAAAILFCAADEAALCRACDEKVH 33
                    7******99******************998 PP
2zf-B_box23.79.9e-085291237
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
                    + ++C+ +e+ ++ ++C  +++ lC +C +  H g    H
  XP_024990849.1 52 DVPRCDICENAPAFFYCGIDGSSLCLQCDMIVHVGgkrtH 91
                    5799**************************9995544455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MRTLCDVCER AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLADP SDVPRCDICE  60
NAPAFFYCGI DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEVSGDRSGR DDELGSNPVD  120
PGEARREPNY QPKHTTRDNQ HHRLSSIGML ENNTDGVGRM ENKLIDLNSK PQRMHGQTSN  180
NQEQGMDISG SNNDCASVVP VGSFKREPGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.12e-82DBB family protein