PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024990959.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 297aa MW: 31989.5 Da PI: 9.3586

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024990959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.1	9.1e-39	26	87	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k +al+cprC+s++tkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+r+nk+sss XP_024990959.1 26 KPQALNCPRCNSAHTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRRNKRSSS 87 67899*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MDAAQWSEGL GMVKSMEEKK TIRAQKPQAL NCPRCNSAHT KFCYYNNYSL SQPRYFCKTC 60 RRYWTEGGSL RNVPVGGGSR RNKRSSSSSS SSVPPPAAAA ASISKNQHQM MMGPPIPSLI 120 AQNPSKTIIQ NHGGQGQGHG QDLNLGYTNV SLQFGNLPYN PNTTTTSSSS QFSAMDFLKS 180 GFADPRQVMM NSLPNTMIMN SPAGLNFSLD GFENGGGYHH HHHQHHHLQG GGGVTNHQGT 240 MSTITTTAGT SENARILFPF EDLKPISTTN SELLEATRGQ GESSSGYWGG GLGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	8e-36	Dof family protein