PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024990960.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family Dof
Protein Properties Length: 270aa    MW: 28708.8 Da    PI: 9.4269
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024990960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof44.63e-1432603663
          zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkksss 63
                    C rryWt+GG+lrnvPvGgg+r+nk+sss
  XP_024990960.1 32 CpRRYWTEGGSLRNVPVGGGSRRNKRSSS 60
                    549**********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDAAQWSEGL GMVKSMEEKK TIRAQKPQAL NCPRRYWTEG GSLRNVPVGG GSRRNKRSSS  60
SSSSSVPPPA AAAASISKNQ HQMMMGPPIP SLIAQNPSKT IIQNHGGQGQ GHGQDLNLGY  120
TNVSLQFGNL PYNPNTTTTS SSSQFSAMDF LKSGFADPRQ VMMNSLPNTM IMNSPAGLNF  180
SLDGFENGGG YHHHHHQHHH LQGGGGVTNH QGTMSTITTT AGTSENARIL FPFEDLKPIS  240
TTNSELLEAT RGQGESSSGY WGGGLGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.12e-11Dof family protein