PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024990967.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 393aa    MW: 43183.4 Da    PI: 4.6399
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024990967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-194897255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d       +  r++lg+f+taeeAa+a+++a+  l+g
  XP_024990967.1 48 RFVGVRQRP-SGRWVAEIKDtI-----QqIRVWLGTFDTAEEAARAYDEAACLLRG 97
                    789******.7*********33.....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MKMSRKRKDV AGEETGNSGN GETGWDQVMN GPTDGGAFVG GAIRARKRFV GVRQRPSGRW  60
VAEIKDTIQQ IRVWLGTFDT AEEAARAYDE AACLLRGANT RTNFWPCNPS NKSSALSSKI  120
TNLLLQRLKA RNGANVSNGA YGASMAITHS FPHHQQFQGS TQVQDSDFHK FFHVSDANSD  180
NTTNYTSATT YTSDFCSPNV IEREGFDSKD GFLGENFRGV DHSLVGDEPK LEGNEETDLG  240
MPDLLFVDDI GSSMNYSPFE IAEEITKPLG EENYNEDSSM LTEAMKRMKF ERNISASLYA  300
FNGISECLRM TFGSGNDSEN RKPEQLSNLG AKNGEIWGET DGENGLANKP SESKHILTSV  360
ESFSSSSSKE GDESFLWSSL DLPSLDMFFS GSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-23ERF family protein