PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024991016.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 321aa MW: 35471 Da PI: 5.8589

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024991016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.9	6.1e-10	153	208	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l + l XP_024991016.1 153 KRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLALFQRDTTGLS 208 9****************************************999877766655555 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MQDPSNPNSK PPNAAAFPFR PSHHRRAHSE VNFRLPEDLD LVSDSFDAPS GSFEEIGSED 60 DLFSTYMDIE KLGSTLNDGG GVLDSNRINN AVLGGGASDD NYGGGGDGEK SSTRSRHRHS 120 NSVDSSSLFT ESIEAKKAMA PDKLAELWTV DPKRAKRILA NRQSAARSKE RKARYITELE 180 RKVQTLQTEA TTLSAQLALF QRDTTGLSSE NTELKLRLQA MEQQAQLRDA LNEALKQEVE 240 RLRMATGEIS RCSDGYNMGM VHHVRYNEAN LFRNQEQTEY HQQDALGRFQ GLDISNSNRG 300 GSHLVKSESL SMSAGETSGT F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40620.1	2e-97	bZIP family protein