PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024991179.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 212aa    MW: 24500.5 Da    PI: 8.8439
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024991179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.000378100123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C k F ++  L  H++ H
  XP_024991179.1  78 FECQYCFKEFVNSQALGGHQNAH 100
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MGKIASDLLS STWEEGEASD QHSTQTCVEK KVRLFGFELH PGTLKTNHLR SVEGDESVNS  60
SSTTTTMEKN LQIEIKKFEC QYCFKEFVNS QALGGHQNAH KKERLKKKRL QLQARRARIN  120
YYLQPYTHNK HGTNVDFHGY YGPEFESSIS FSQYDDDLLS FRDPCNFTLT HVDRSRQNYR  180
PVAMKPSPRP IDLKQNYARL DLQLSLSSNS IM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.11e-13C2H2 family protein