PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024991228.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 273aa MW: 29830.3 Da PI: 6.5018

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024991228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.6	1.5e-09	91	137	5	51
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 k +r NReA r++R++Kka+ + Le++v L a N++L k++++ XP_024991228.1 91 KGKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQQLMKRIQS 137 66788899************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEDGELDFSS HELFTGANMG DIPSSGSIDS FFDDIFKDTH ACTHTHTCNP PGPDSSHTHT 60 CYHVHTKIVP AMSGDDDKTP TDDTAESNEK KGKKRPLGNR EAVRKYREKK KARAASLEDE 120 VVRLRALNQQ LMKRIQSQAG LEAEVARLKC LLVDIRGRIE GEIGSFPYQK QLPANHNIAN 180 PNMTGGYVMN PCNMQCGDQA YCLHPVVDGK TGEDASIHDP ALNGCEFENL HCLGNQNPLL 240 NELPGCGTED GFPVANPSGG RTKRKGARST ISK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	4e-82	bZIP family protein