PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024991277.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 176aa    MW: 19373.2 Da    PI: 9.7093
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024991277.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.00154668123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_024991277.1 46 FECKTCNRQFPSFQALGGHRASH 68
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MVYLPMKRPR EAELDTAINN MANCLMLLSR GCSTNERYEN SPSRVFECKT CNRQFPSFQA  60
LGGHRASHKK PRLNTDGDLA HGTNLMPAKP KAHECSICGL EFAIGQALGG HMRRHRTAVT  120
NEKKSSASSL GSTTAPVVKK VNSRRVFSLD LNLTPLENDL EFGSGKVVPT TVELFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.14e-45C2H2 family protein