PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024991309.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 220aa    MW: 23925.7 Da    PI: 8.668
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024991309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97e-202473255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrdp   g ++r++lg+f+tae Aa+a++aa+ +++g
  XP_024991309.1 24 HYRGVRKRP-WGRYAAEIRDP---GTKTRVWLGTFDTAEAAARAYDAAAINFRG 73
                    6********.**********8...325***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MVMKNETAKP LTAARKVDAV NEVHYRGVRK RPWGRYAAEI RDPGTKTRVW LGTFDTAEAA  60
ARAYDAAAIN FRGSKAKINF PLSLDSAAGQ NDSRSSTVES SSRDSEHNAP VELDLMRCVV  120
GEATAVGGCQ FFVNGNQQTV ALLPHAQPLM PFGVRPGMTM NRGHPYPFHQ TEQHFNGGYG  180
GRAASESGSS NAADYIPRDT SYSKRELNLD LNLAPPTVEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.16e-28ERF family protein