PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024991362.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 586aa MW: 63959.1 Da PI: 7.2715

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024991362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.1	2.9e-11	435	493	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ +a l+s++ XP_024991362.1 435 KRAKRILANRQSAARSKERKMRYITELEHKVQTLQTEATTLSAQLTLLQRDSAGLTSQN 493 9****************************************************999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MGDTEEGNSD MIQRVQSSFG TSSSVPKQQP QKPVSFNQLD IPQLNTAPFR GQNRQFSPNY 60 NLDNSSKRVG IPPSHPQFPP VSPYSQIPVT QTSGNNHKIG GSQSFTHGPG PSHSRSLSQP 120 SFFPLDSLPP LSPSPYRDSP SARSSDQLPG DISMEERDGN SHSLLPPSSP FGRGNSARTG 180 ENLPPRKAHR RSNSDIPFGF STILQSSPPL IPLRSPNTLE RAASSRDNSG SKPIQLVKRE 240 SSWEKVGGEG NAEGTGEKKS EGEVVDDLFS AYMNLDNLDT LNSSGTDDKQ GTENREDLDS 300 RASGTKTNGG DSSDNEATSS VNESGNHMQR SGISSISDKR EGIKRSAGGD IAPTTRHYRS 360 VSMDSFMGRM NFGDESPKLP PSPGGNVNQL SPNNSIDSNS NTFSLEFGNG EFTGAELKKI 420 MANEKLAEIA LTDPKRAKRI LANRQSAARS KERKMRYITE LEHKVQTLQT EATTLSAQLT 480 LLQRDSAGLT SQNNELKFRL QAMEQQAQLR DALNEALTAE VQRLKITTTE LSGDAAKFSQ 540 LSISPQMFQL HQQQQQQQHS HQMQHQNPQQ LQQQNGGAGT KHESNQ

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MGDTEEGNSD MIQRVQSSFG TSSSVPKQQP QKPVSFNQLD IPQLNTAPFR GQNRQFSPNY  60
NLDNSSKRVG IPPSHPQFPP VSPYSQIPVT QTSGNNHKIG GSQSFTHGPG PSHSRSLSQP  120
SFFPLDSLPP LSPSPYRDSP SARSSDQLPG DISMEERDGN SHSLLPPSSP FGRGNSARTG  180
ENLPPRKAHR RSNSDIPFGF STILQSSPPL IPLRSPNTLE RAASSRDNSG SKPIQLVKRE  240
SSWEKVGGEG NAEGTGEKKS EGEVVDDLFS AYMNLDNLDT LNSSGTDDKQ GTENREDLDS  300
RASGTKTNGG DSSDNEATSS VNESGNHMQR SGISSISDKR EGIKRSAGGD IAPTTRHYRS  360
VSMDSFMGRM NFGDESPKLP PSPGGNVNQL SPNNSIDSNS NTFSLEFGNG EFTGAELKKI  420
MANEKLAEIA LTDPKRAKRI LANRQSAARS KERKMRYITE LEHKVQTLQT EATTLSAQLT  480
LLQRDSAGLT SQNNELKFRL QAMEQQAQLR DALNEALTAE VQRLKITTTE LSGDAAKFSQ  540
LSISPQMFQL HQQQQQQQHS HQMQHQNPQQ LQQQNGGAGT KHESNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-148	bZIP family protein