PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024991431.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 276aa    MW: 30644.2 Da    PI: 5.9904
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024991431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.7e-20128179256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrdps+ g  +r++lg+++ta eAaka+++a+ kl+g+
  XP_024991431.1 128 HYRGVRQRP-WGKFAAEIRDPSKKG--TRVWLGTYDTAVEAAKAYDRAAFKLRGN 179
                     8********.**********97744..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MASLDEFSAL DLIRQHLLID DLSFLQTYSV LADHEHEPTV GFPLTSSSSS SSSFKSSVIA  60
QIQTNDPVSD HPFEFGVDPL PMLRTEKTSN NGFNERKTSV NMSFPFHPPT IVKSGVVFKE  120
KDFEDRKHYR GVRQRPWGKF AAEIRDPSKK GTRVWLGTYD TAVEAAKAYD RAAFKLRGNK  180
AILNFPLEIG NSDEAETETK VVRSNSRKRA AGKSEVEVNE TRKEVKVEPE TADSRAALTP  240
TSWTAVLDGG DGNDIFEVRS SSPYPSIDFT SGCMVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-46ERF family protein