PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024991475.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 288aa MW: 32721 Da PI: 5.5868

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024991475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.3	7e-08	131	186	4	59
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 k+ +r +N+ AA +sR+RKk++++ Le k+ e+e ++L + l+ e ++l XP_024991475.1 131 AKKRKRQLRNKDAALKSRERKKMYVKDLELKSRYYEGECRRLGSLLQCFMAENQAL 186 7999****************************999999999988777766666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MEDQIDWDDL FDDTFFDSSS ILPTSSPDHG DNHFPLSLHD VEQLLLKDND EIPTGDAFNS 60 AQETPDGFFH DILLDSPLDG ERSGEVVDVS DGDNSIDEHI HKAIDDQKIE AVDDHKEEKQ 120 NSDDDPNDPL AKKRKRQLRN KDAALKSRER KKMYVKDLEL KSRYYEGECR RLGSLLQCFM 180 AENQALRFSL HSNKAYNASM TKQESAVLLL ESLLLGSLLW LIGNVCQLVL HHHPSLLLQV 240 RGEKVPSLKS LVLVKLGSQR RCRLLVGKGY KASRSRIRMP INMIGLVF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	156	KKRKRQLRNKDAALKSRERKKMYVK
2	133	157	KKRKRQLRNKDAALKSRERKKMYVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	8e-18	bZIP family protein