PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024991591.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

NF-YB

Protein Properties

Length: 182aa MW: 19974.4 Da PI: 5.7326

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024991591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	159	7.5e-50	25	114	2	91
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 ++q+r+lPianv+rimkk lP+nak+sk+aketvqecvsefisf+t+ea+dkcqrekrktingddllwa++tlGf+dyv +lk yl+ky XP_024991591.1 25 KDQERLLPIANVGRIMKKSLPGNAKVSKEAKETVQECVSEFISFITGEAADKCQREKRKTINGDDLLWAMTTLGFQDYVGSLKSYLSKYV 114 79**************************************************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MTGKRTQTGS TRTLSSSNVS DGSSKDQERL LPIANVGRIM KKSLPGNAKV SKEAKETVQE 60 CVSEFISFIT GEAADKCQRE KRKTINGDDL LWAMTTLGFQ DYVGSLKSYL SKYVGTCDSS 120 SHTDIGVTEI GCDVSDSTPA QSISQGFNDL YQIVGHGDEL ISMVKLHEAK TVMMTQDQRF 180 EW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	8e-53	NF-YB family protein