PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024991657.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 383aa    MW: 43787.2 Da    PI: 6.0978
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024991657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-19185235256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_024991657.1 185 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 235
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MAAARNSGKS KKSMEETRNF TQMDFDQMGF DETREWKQVF DEASTHTHSR PLKKIRSPEH  60
QSSSSSSSSS SRLFPFAFDG NNLHTIESLQ QFRSNSHLNP VYPPPPPNPQ MISFDPQQHY  120
NHHPQPPMIH QNFGFPPYFS GENSGLSQQQ LLQYWSDALN LSPRGRMMMM NKIRPPIQPL  180
HTTKLYRGVR QRHWGKWVAE IRLPRNRTRL WLGTFDTAED AAMAYDREAF KLRGENARLN  240
FPERFLGKTK NESVSAGQSS SSSSPPPTEL VKDNGKTATE TVKLKESEET VTENEGVEVG  300
FHGDQVTGEA NSDPAWGEMA ENWYNSGWGP GSAMWDSLDS NNNLMFPSNF NLENQQQQEQ  360
EQGNYDFSSF ESQMSPFFWK DEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.19e-52ERF family protein