PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024991711.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 226aa    MW: 25486.1 Da    PI: 9.6444
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024991711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.00051101121121
                     EEETTTTEEESSHHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                     ++C+ CgksF ++  L  H+r
  XP_024991711.1 101 HPCSECGKSFWSWKALFGHMR 121
                     78******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MFSSEKMNKD MILGTTTSST SSDLQLCPAS PDAREIFRPT IHFSDECGGN FHPINLKPHQ  60
QNPRKKRSKM MRVQNIKAIV GGSEAKHGKK PEAGGPTKIS HPCSECGKSF WSWKALFGHM  120
RCHPERPWRG INPPPNPYNT TTNEDRYVAS CLLMLAKGPS HYEECKKNVK GCLGKMRREG  180
PKKRWHWERE SEDVAATSVY RLDLNLPADA PPQDYSNLGL DLRLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.13e-25C2H2 family protein