PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024991738.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 297aa MW: 32097.8 Da PI: 9.4734

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024991738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.6e-39	67	127	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+a+kcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkkss XP_024991738.1 67 PETAMKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSS 127 67899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MVFSSLPSYL DPPNWPQQQQ VGGVGGDHEI SQLPPPLLPP PPPLGSGGDA RSVQMSERAR 60 MGKLPQPETA MKCPRCESTN TKFCYFNNYS LSQPRHFCKT CRRYWTRGGA LRNVPVGGGC 120 RRNKKSSKGS RGSRSKSPSA TTSSTSNTAI SPNSCTTDIL GHLPHNTRPS QFPILPPLNH 180 FGGGDLGLTF AGGNGNNLIH LGHDSNYPSN KFAQFPFLEA ANAGMYGEGP SNYGGQVGGM 240 KMEDNHHRHH QQQGLNLSRN FMDIPGNEQF LGTSNVAWST TDLSGFNSSS TTTTHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	4e-35	Dof family protein