PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024992093.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 184aa MW: 21238.7 Da PI: 8.8754

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024992093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.1	4.4e-14	56	104	4	52
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +++ rr+++NRe+ArrsR RK+ ++eeL + v L+++N+ L ++l++ XP_024992093.1 56 DRKHRRMISNRESARRSRMRKQRQLEELCTQVVWLKNQNHGLLDQLNRF 104 7899***************************************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MAANYHTSFS SSVDFGTNVH HHHRQPMVKQ FSSSVSCNNS SSTWDHESQM NMVIQDRKHR 60 RMISNRESAR RSRMRKQRQL EELCTQVVWL KNQNHGLLDQ LNRFLESQKQ VIQENRKLKK 120 ETLELRKLLS EAQLATTYTG LGDIGFFRDL DDDGYLLPSC TTVQSSHETT VSSANTNDSS 180 TLLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	77	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	6e-25	bZIP family protein