PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992131.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 521aa    MW: 56797.3 Da    PI: 7.3415
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.94.1e-33232288259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkk+vers  ++ v+ei+Y+g+Hnh+
  XP_024992131.1 232 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKQVERSV-EGLVTEIIYKGQHNHQ 288
                     8****************************************.***************8 PP
2WRKY106.91e-33404462159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+a+dpk+v++tYeg+Hnh+
  XP_024992131.1 404 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSQGCNVRKHVERAASDPKAVITTYEGKHNHD 462
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MDENRGLYSS APSARPSITL PARSTVESLF TGGGSVMDAS PGPMTLVSNF FSENDPDSDC  60
RSFSQLLSGA MLSPAEIPDP RPSIGLDMGH SYSNKQSDNG GGSGGGNVDF HFSNNGRPSS  120
LVVTQQSMFT IPPGLTPGSL LDSPGFFPPT QSSLGMSHQQ ALAQVTAQAV YPSLSAPSSS  180
LPQIPSFTSN ATTYQRLPRA MPDHNTAKES SDLSNSDNRS QPSSIVVDKP ADDGYNWRKY  240
GQKQVKGSEY PRSYYKCTHP NCPVKKQVER SVEGLVTEII YKGQHNHQPP QSKRGKDTGN  300
GTSSQYDHGF EGQNGTSSHS REGRLVHSLA IKEQESSQAT YEHSGSSDSE EVGNDVTRVD  360
ERHEDEPQAK RRNAEVGALD PVSSHRAVTE PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG  420
NPHPRSYYKC TSQGCNVRKH VERAASDPKA VITTYEGKHN HDVPAARNSS HNMATTTTSQ  480
IQPANYAPTG THSLIRRPEY PNRQQPPPPS GLLQFKEERI T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-143WRKY family protein