PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992302.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 200aa    MW: 22595.3 Da    PI: 6.6221
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000254163123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H++ H
  XP_024992302.1 41 YSCSFCRREFRSAQGLGGHMNIH 63
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MWVKRKNIEL MNPFDESWEE EAFAEDGRGP LGGFVWPPRS YSCSFCRREF RSAQGLGGHM  60
NIHRRERARL KQSLNSTTPP HNPSPHQNLF RSANPSFSSS PSSRVSLRTL CSNSDTKSTS  120
CVSDDQVQML LPSPDHGAAV ETNFFLGFRL DSPPPGNGND DHHRFDDEEV MNCKRQKTIV  180
MPLMIMGSIE EVDLELRLGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.11e-26C2H2 family protein