PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992313.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 145aa    MW: 16189.9 Da    PI: 9.4102
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992313.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.6e-212172256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +++GVr ++ +g++++eIrdp++ng  +r +lg+f+taeeAa+a+++a+ +l+g+
  XP_024992313.1 21 RFRGVRKRP-WGKYASEIRDPTKNG--QRTWLGTFDTAEEAARAYDHAAFNLRGH 72
                    69*******.***********9998..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MEGGGPTYNG KAMHHDENEV RFRGVRKRPW GKYASEIRDP TKNGQRTWLG TFDTAEEAAR  60
AYDHAAFNLR GHLATLNFPA EYLSKLPDPP SFRSSSSSSS SSSLGCNTSR GGSSTGNEKH  120
VIVLEYLDDR LLQELLRETT KEKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.16e-28ERF family protein