PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992486.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 289aa    MW: 31559 Da    PI: 9.007
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.9e-204191256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d s   ++ r +lg+++++eeAa+a+++a+++l+ge
  XP_024992486.1 41 KFVGVRQRP-SGRWVAEIKDSS---QKVRLWLGTYDSPEEAARAYDEAARALRGE 91
                    799******.7*********42...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MMIIAASETT KTAVTSTVTA TAPAAITTTP TMKVVKPATR KFVGVRQRPS GRWVAEIKDS  60
SQKVRLWLGT YDSPEEAARA YDEAARALRG ENARTNFAPM VNSNPCQINS ISGSLSESES  120
RRSLSFSSLK ARLSKNLQSI MARTTENKSS PKSRVSDHFT FASIFNFKGN YQYQNNVVGD  180
FDKVVQPSVI VPPQTMANHD VATTYNSSWE SSSVSDCSNE LASFNTTHYG LDSDGSDIGE  240
GSYFGDQMIS GWISSPDISD GGSRSKRFKV SSSVFVPPKF SDNDFAFPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-17ERF family protein