PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992492.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GeBP
Protein Properties Length: 199aa    MW: 23260.6 Da    PI: 5.0152
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57340.11e-12931831197
          DUF573  11 DeivlLqGlidfkaktgkspsddidafyefvkksis...fkvsksqlveKirrLKkKfkkkvkkaksgkepsfs.kehdqkifelskkiWg 97 
                      ei lL+G++df +++g  p+ d +++ +f+ + ++   f     +l  K+ +L  +f ++ +k+++g++++ +  + +++if ls+++Wg
  XP_024992492.1  93 EEINLLKGILDFYHTNGRYPYPDSNDLQNFFINWVQergFYRDAMDLNRKMESLNLRFLTNTEKKSNGEDIEANmDPTEREIFRLSNRVWG 183
                     69****************9998877777777666661115667789999***************99999988752789************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDDPFRPPHS HFYSGGSTRS GSSGSTSKRK ITESEEEDVD ITGLSTPTKR HQTESSWTRK  60
ETEDTAATTT TTTSISRRWN EQTRPSPCPW RREEINLLKG ILDFYHTNGR YPYPDSNDLQ  120
NFFINWVQER GFYRDAMDLN RKMESLNLRF LTNTEKKSNG EDIEANMDPT EREIFRLSNR  180
VWGRENDDDA MMVDLIQMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00270.11e-06GeBP family protein