PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992502.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 341aa    MW: 39216 Da    PI: 8.8218
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.7e-17156205255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +grW AeIrdp     r +r++lg+f+tae+Aa  +++ + +l+g
  XP_024992502.1 156 KFRGVRQRP-WGRWSAEIRDPA----RrTRVWLGTFDTAEQAALVYDRRAIELRG 205
                     89*******.**********82....35********************9999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MLDCPEIPVT MFNYLEKFCT RKNLKENRSH AGNYRSQLRR FEIHNPQIHV KIDPQFMGSS  60
PKFRLINRTF TTNLQSLMDS PKVVTISMTD YDATDSSSDE ENPQFRRRKV KRYMTVIKLQ  120
QNFSGKISSE NGGSKKQSRR KKEPAAVGAS SGSERKFRGV RQRPWGRWSA EIRDPARRTR  180
VWLGTFDTAE QAALVYDRRA IELRGSQALT NFLQPPPPPP PVIAPVSVSG QYSRKESPDI  240
CSPTSVLRFC KTEDVSENPT KPNEHEPFTK NPFSDDYFRY DSNSEYDFFD FRIPSPMILE  300
EINFPDKIDT ESSKILSGLD DDLESWVSDV DSFFQDPLAA K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-42ERF family protein