PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992519.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family Dof
Protein Properties Length: 271aa    MW: 30247.2 Da    PI: 9.3098
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.61.3e-382988261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    +e+al+cprC+stntkfCyynnysl+qPryfCk+C+ryWtkGG+lr vPvGgg+rknk+s
  XP_024992519.1 29 HEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCKRYWTKGGSLRSVPVGGGSRKNKRS 88
                    7899*****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDAAQWPKDV RNNNGSYNQV QERKIKPQHE QALNCPRCNS TNTKFCYYNN YSLTQPRYFC  60
KGCKRYWTKG GSLRSVPVGG GSRKNKRSIA STTSTSSSMP KPIDLSQFSS QNFTTHEGQD  120
LNLGFQATQE EYHHGFSQFL KLPKIENSNA TFLSSSLASS TLGSVSAQDF LRARTPSDGL  180
NSFSTTDTTM FNETRFSLQD FKPTMGFPFQ GNGIKYGNFQ GNQEDGERIM LPFGVLNQQH  240
SSRENNQNMG QGNSTGYWNE ALGGGSSTLY N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.42e-47Dof family protein