PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024992685.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 317aa MW: 34529.2 Da PI: 8.8367

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024992685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.4e-39	25	85	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ XP_024992685.1 25 QHEALKCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 85 67899*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MASGVRVMEK PVQLQHQHQQ HQQQQHEALK CPRCDSANTK FCYYNNYSLS QPRHFCKACK 60 RYWTRGGTLR NVPVGGGCRK NKRVKRPIAS TAHAAATPSS VDHHTNPNPN PNPNPNPNLD 120 RLPSSTTSNG NTNHHLNPLF YGLLPQNHNY PRFDARVSGV NDTLVSGYDL LQPHMNASGL 180 GFSSSAPGAS LVASHAQNSS LTFSNYPTSM YGGGSTCSST SAPTMASLLA SSLNQQQRFM 240 GFGAYDGSSM VKDLKMEATQ NRMEWNNNFH GQNKDDQIEA VVSSDPNNSL LWDTTPGDGG 300 GWLDPTNNIG SSVPSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	2e-39	Dof family protein