PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992745.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 244aa    MW: 26436.6 Da    PI: 9.5157
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-202878256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +++GVr ++ +gr++AeIrdp   gk++r++lg+f+taeeAaka++aa+++++g+
  XP_024992745.1 28 HFRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAAKAYDAAAREFRGA 78
                    69*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MAPRDRTPTA VKVNGGSAGV GVQVKEAHFR GVRKRPWGRY AAEIRDPGKK TRVWLGTFDT  60
AEEAAKAYDA AAREFRGAKA KTNFPIHDDN GLLKVQKDEL FKKASYVSQQ STSQGSTIES  120
PSREAESVVP SLDLNLSYGV AAPPAVQFPF HQKNMYCFSP STGAVTGFFT PPSNQMFYFP  180
DGIFLSGKVQ VHHSGGYDSS ALPFRQSVSD DSNSSSVVDL KPLPTPASQR LIIDLNLPPP  240
AESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-29ERF family protein