PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992907.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 288aa    MW: 32500.7 Da    PI: 5.2542
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-3074132259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++v +tY+ eHnh+
  XP_024992907.1  74 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPTMVMVTYSCEHNHP 132
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEVGFHPFTI HQEDNQNSPE NSDDSPASAL FYDTKATSTS SPKRRRGTQK RVVQVPIKDV  60
EGSRLKGETN APPSDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ VERSRTDPTM  120
VMVTYSCEHN HPWPASRNNN HHHHNAPASP PSTTTTEPAT SNIDDQVEVE PPTFTRQSEP  180
ELEREPEPEP DQKFTSLEVG SCGPFAATTD QYRWFSDLDS TSSTMLESPL MARDIVEDSD  240
MAMIFSIRED EESFFADLGE LPECTTVFRR KVVEEHRRNL APWCGTTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-58WRKY family protein