PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024993128.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

VOZ

Protein Properties

Length: 480aa MW: 54301.3 Da PI: 6.2039

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024993128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	395.7	1e-121	201	424	1	217
VOZ 1 pppsaflgpkcalwdctrpaqg......se.wlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataks 88 pppsaflgpkcalwdc+rpaq ++ w++ ycs++ha++a neg+pg++p++rpkgi+lkd+llf+al ak+qgk+vg+pecegaataks XP_024993128.1 201 PPPSAFLGPKCALWDCPRPAQAwcferaVQwWCNIYCSHLHAAIAQNEGQPGMNPIIRPKGIELKDNLLFSALCAKAQGKNVGVPECEGAATAKS 295 89****************963333323337889******************************************************** PP VOZ 89 pwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalaly 183 pwna+elfdls++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++e g lkrsyymdpqp++ +ewhlyeyei+++da+aly XP_024993128.1 296 PWNAPELFDLSVFEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVINESGWLKRSYYMDPQPMKFLEWHLYEYEISKYDACALY 390 ******************************************************************************************* PP VOZ 184 rlelklvdekksakgkvskdsladlqkklgrlta 217 rlelklvd k+s+kgk+ sl+dlqk++grl+a XP_024993128.1 391 RLELKLVDRKRSTKGKIGDASLVDLQKQMGRLSA 424 ******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MGKGTKSHRI FKDRAMNRVD DLQGMFMDLQ SARKESRKID MALLEEQVHQ MLKEWKKELN 60 EPSPASSLQQ GASLVSFSPD ISRLLQLYDE EEDDATSGLA APKPDPDAQN APEDTAFHKN 120 FVAAQVAQEQ GFKLLDQCKY LDSPFGMNTT AVHNTGVDAQ LDHFSFDLPR EFEENCVSRF 180 YGMWGEDGSH PITGFLPNIC PPPSAFLGPK CALWDCPRPA QAWCFERAVQ WWCNIYCSHL 240 HAAIAQNEGQ PGMNPIIRPK GIELKDNLLF SALCAKAQGK NVGVPECEGA ATAKSPWNAP 300 ELFDLSVFEG ETIREWLFFD KPRRAFESGN RKQRSLPDYN GRGWHESRKQ VINESGWLKR 360 SYYMDPQPMK FLEWHLYEYE ISKYDACALY RLELKLVDRK RSTKGKIGDA SLVDLQKQMG 420 RLSAEFRLEN NKRSVKGRGR ASATVYPASS QTAPTTDVVD YGANAGFNYL MEDLGGYYLT

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MGKGTKSHRI FKDRAMNRVD DLQGMFMDLQ SARKESRKID MALLEEQVHQ MLKEWKKELN  60
EPSPASSLQQ GASLVSFSPD ISRLLQLYDE EEDDATSGLA APKPDPDAQN APEDTAFHKN  120
FVAAQVAQEQ GFKLLDQCKY LDSPFGMNTT AVHNTGVDAQ LDHFSFDLPR EFEENCVSRF  180
YGMWGEDGSH PITGFLPNIC PPPSAFLGPK CALWDCPRPA QAWCFERAVQ WWCNIYCSHL  240
HAAIAQNEGQ PGMNPIIRPK GIELKDNLLF SALCAKAQGK NVGVPECEGA ATAKSPWNAP  300
ELFDLSVFEG ETIREWLFFD KPRRAFESGN RKQRSLPDYN GRGWHESRKQ VINESGWLKR  360
SYYMDPQPMK FLEWHLYEYE ISKYDACALY RLELKLVDRK RSTKGKIGDA SLVDLQKQMG  420
RLSAEFRLEN NKRSVKGRGR ASATVYPASS QTAPTTDVVD YGANAGFNYL MEDLGGYYLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein