PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024993134.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 434aa MW: 47698 Da PI: 8.1746

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024993134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.2	8.7e-09	124	185	3	64
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 e ++ rr NRe+Ar R++a eeL++k+ L eN+ Lkke e+ +k++++lk+++e XP_024993134.1 124 EARKIRRVLANRESARQTIHRRQAIFEELTRKAVDLAWENENLKKEKETATKKYDSLKTKNE 185 78899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MDTIRASSPS TPIADMVKIE MEAAEALAGL AYFPANSPGT QSRVKHESND GNNSSFHSFP 60 KCSTNSYQDA TNFMLKEPEK LGILTSKSVK DEQSTDLRLN PTYPTNHASS GRKSRQNLTE 120 AEMEARKIRR VLANRESARQ TIHRRQAIFE ELTRKAVDLA WENENLKKEK ETATKKYDSL 180 KTKNECLKAQ MVKVMNVEAG EESNATNEPT VSASSTNSPF IIYNQPPFLP FVWPNSVQLQ 240 CGGIVFPSHI PDSSSCEEGN SMGAAGPVYL LPYPWLVTTS LPQTQSGGSG GSEHHHHGHG 300 HGHDHGHGRP HSFNLNDKPK ESSSECQQQQ LFPEKVSKEG SPSKRGGFPP DGGGGGTTEA 360 MAPVSCDDTD NNDNLIKVKE DDIKGNGSRS EQIPVVWSAG KRVGDTAAAE ARKRRKQLTR 420 LKNNFHGRQL RIMH

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MDTIRASSPS TPIADMVKIE MEAAEALAGL AYFPANSPGT QSRVKHESND GNNSSFHSFP  60
KCSTNSYQDA TNFMLKEPEK LGILTSKSVK DEQSTDLRLN PTYPTNHASS GRKSRQNLTE  120
AEMEARKIRR VLANRESARQ TIHRRQAIFE ELTRKAVDLA WENENLKKEK ETATKKYDSL  180
KTKNECLKAQ MVKVMNVEAG EESNATNEPT VSASSTNSPF IIYNQPPFLP FVWPNSVQLQ  240
CGGIVFPSHI PDSSSCEEGN SMGAAGPVYL LPYPWLVTTS LPQTQSGGSG GSEHHHHGHG  300
HGHDHGHGRP HSFNLNDKPK ESSSECQQQQ LFPEKVSKEG SPSKRGGFPP DGGGGGTTEA  360
MAPVSCDDTD NNDNLIKVKE DDIKGNGSRS EQIPVVWSAG KRVGDTAAAE ARKRRKQLTR  420
LKNNFHGRQL RIMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	9e-31	bZIP family protein