PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024993193.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 400aa MW: 42286.8 Da PI: 8.0752

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024993193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.4	2.8e-22	260	322	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L++eN +Lk+e+++l+++++klk ++ XP_024993193.1 260 ERELKRERRKQSNRESARRSRLRKQAEAEELAIKVESLTNENLTLKSEINRLTDNSEKLKLQN 322 89**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MGNCEETKSC KPEKSSSPPP EHQQTSVHAY PDWAAMQAYY GPRMAMPPYF NSAVASGHAP 60 PPYMWGPPQH MMPPYAAMYP HGGVYPHPGV PLAGSPMSID SPAKSSGNSD RGLLKKLKGF 120 DGLAMSIGNC NGNGDSVGGG NDNGHSQSGE TEGSSEGSDG NTTEGGQNSG KRSREGSPNA 180 PEVGKTEPLS GQFFPTEVNG ASKKVTGLTV TVPKVSGKVG AALSANLASE SELKNSPTTA 240 AKMAAATVAM VPGESLLQNE RELKRERRKQ SNRESARRSR LRKQAEAEEL AIKVESLTNE 300 NLTLKSEINR LTDNSEKLKL QNAKLIEKLK NAQQDTEDPR LSPKGSSLST ANLLSRVDNG 360 SSARTDGDGE VYENNNNQNS GAKLRQLLDA SPRADAVAAG

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MGNCEETKSC KPEKSSSPPP EHQQTSVHAY PDWAAMQAYY GPRMAMPPYF NSAVASGHAP  60
PPYMWGPPQH MMPPYAAMYP HGGVYPHPGV PLAGSPMSID SPAKSSGNSD RGLLKKLKGF  120
DGLAMSIGNC NGNGDSVGGG NDNGHSQSGE TEGSSEGSDG NTTEGGQNSG KRSREGSPNA  180
PEVGKTEPLS GQFFPTEVNG ASKKVTGLTV TVPKVSGKVG AALSANLASE SELKNSPTTA  240
AKMAAATVAM VPGESLLQNE RELKRERRKQ SNRESARRSR LRKQAEAEEL AIKVESLTNE  300
NLTLKSEINR LTDNSEKLKL QNAKLIEKLK NAQQDTEDPR LSPKGSSLST ANLLSRVDNG  360
SSARTDGDGE VYENNNNQNS GAKLRQLLDA SPRADAVAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	283	RRSRLRK
2	277	284	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	5e-41	bZIP family protein