PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024993482.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 186aa    MW: 20258.3 Da    PI: 4.6082
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024993482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483.1e-152675155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+G+r ++  g+Wv+eIr+p   +k++r++lg++ t+e+Aa+a++ a ++l+g
  XP_024993482.1 26 PVYHGIR-CR-AGKWVSEIREP---NKSTRIWLGTYPTPEMAAAAYDVASLALKG 75
                    6799**9.65.7*********9...336*********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MASRRHRNSL PQNDQSAAGS SSSRHPVYHG IRCRAGKWVS EIREPNKSTR IWLGTYPTPE  60
MAAAAYDVAS LALKGSYAVL NFPDSILSNT LPECPTADDI RAAAATAAAA RAPAYDTNFG  120
GNMTVNDQTA PPQEFVDDEA LFGMPNLLSD MAEGMLLSPP RIDYNQPDDD NAYYNYYSGG  180
GNLWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-32ERF family protein