PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024993714.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 181aa MW: 20916.3 Da PI: 9.8921

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024993714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.9	1.2e-09	69	113	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+++NRe+ArrsR RK++ +e+L++ v ++ N++L + l XP_024993714.1 69 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRHKTGNRELMNHL 113 5789**********************************9998665 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MPSDLFLGTG FTPWDTVTVE TPFVYPPQES VFSFSGSDDS TPKTNSSNSG SDDGEPEQNL 60 PEVDPIDERK RRRMISNRES ARRSRMRKQK HLENLRNQVN RHKTGNRELM NHLRFVSHHG 120 QLVRQENERL RSESVMLRQK LGDIRQVLLV RQLQSQLFSS AWPCNNNVTS MNEQNPPSLI 180 T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	73	RKRRR
2	69	90	RKRRRMISNRESARRSRMRKQK
3	82	89	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37730.1	1e-24	bZIP family protein