PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994011.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 192aa    MW: 21007.1 Da    PI: 6.5255
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY37.54.9e-12140161122
                     ---SS-EEEEEEE--TT-SS-E CS
            WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                     ldDgy+WrKYGqK vk+s+fpr
  XP_024994011.1 140 LDDGYRWRKYGQKAVKNSPFPR 161
                     59*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MANSAFSDQI PSSSVYGGGG GGGLFDIPQG YSYLDMLGFQ QDYGGASSLF DLLQQPSSVV  60
EAPAPPETSE VVNTPTTISS SLSSSSNDHL NDVDQENNNT RSDDDQQKSA DKQLKAKKKN  120
PKKQREPRFA FMTKTEVDHL DDGYRWRKYG QKAVKNSPFP RPVQSNPTSD KSCCKRVLPP  180
TYSVSSSTWI SP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.11e-19WRKY family protein