PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994163.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 232aa    MW: 26575.9 Da    PI: 6.1544
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994163.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.7e-2187136255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++ a+k+++g
  XP_024994163.1  87 KYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDDAAKRIRG 136
                     8********.**********94....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MCGGALISDA DPVFNRDRKL TADDLWSEFD ASDLYGWDFK PQTLCYATEV ATKNETISDR  60
KKFITKEPRD ERTRKPSENK AKPRKNKYRG IRQRPWGKWA AEIRDPQKGV RVWLGTFNTA  120
EEAARAYDDA AKRIRGDKAK LNFPMPPAKK LCVEPPTEST QLAMHGPPSP PALLDYNQFQ  180
NQVYHPSSVA DEYEFKEQIS NLETFLGLDH ELTQFGGLSD ESAHLWMMDD FI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-53ERF family protein