PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024994287.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 467aa MW: 51314.6 Da PI: 6.66

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024994287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.7	1.4e-09	181	222	5	46
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++Lk XP_024994287.1 181 KILRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQELK 222 5679*************************9888888887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MQSFTTPPPS ASASDLYCHS PFYIRADENG RPDTRLADLG DLQHSSVFHQ EDAVDLSRSS 60 IYNEIKAGNA ALLSNNLQFR PHHMNFGSTT EMSSIGTGEF MMQHQKGTPS TMVASGGGSG 120 GGGGGLGKGH FENWGESAIA DNSQQTDTST DIDTDDKNQF NSVQHGGQLA VDSMGKIGDQ 180 KILRRLAQNR EAARKSRLRK KAYVQQLENS RLKLSQLEQE LKRARQQGMF IATGVSGDQS 240 HLVGGNGALA FDMDYARWLD DHQRLINDVR SAVNSHVADN ELHLLVDAVM SHYDDIFRLK 300 SIAAKSDVFH MLSGMWKSPA ERCFMWIGGF RSSELLKILG NHLEPLTDQQ LMGICNLQQS 360 SQQAEDALSQ GMEALQQSLV DTLSSASMGS TGAGNVADYM GQMAIAMGKL ATLENFLHQA 420 DLLRQQTLQQ LHRILTTRQA ARALLVISDY MSRLRALSSL WLARPKD

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MQSFTTPPPS ASASDLYCHS PFYIRADENG RPDTRLADLG DLQHSSVFHQ EDAVDLSRSS  60
IYNEIKAGNA ALLSNNLQFR PHHMNFGSTT EMSSIGTGEF MMQHQKGTPS TMVASGGGSG  120
GGGGGLGKGH FENWGESAIA DNSQQTDTST DIDTDDKNQF NSVQHGGQLA VDSMGKIGDQ  180
KILRRLAQNR EAARKSRLRK KAYVQQLENS RLKLSQLEQE LKRARQQGMF IATGVSGDQS  240
HLVGGNGALA FDMDYARWLD DHQRLINDVR SAVNSHVADN ELHLLVDAVM SHYDDIFRLK  300
SIAAKSDVFH MLSGMWKSPA ERCFMWIGGF RSSELLKILG NHLEPLTDQQ LMGICNLQQS  360
SQQAEDALSQ GMEALQQSLV DTLSSASMGS TGAGNVADYM GQMAIAMGKL ATLENFLHQA  420
DLLRQQTLQQ LHRILTTRQA ARALLVISDY MSRLRALSSL WLARPKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-142	bZIP family protein