PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994587.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 200aa    MW: 22906.5 Da    PI: 9.1621
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.84.1e-32122180159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+++fpr+YYrCt++gC+vkk+v+r ++d  vv++tYeg H h+
  XP_024994587.1 122 LDDGYRWRKYGQKAVKNNKFPRNYYRCTYQGCNVKKQVQRLSNDDGVVVTTYEGMHSHP 180
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEINNGGMFS YTSSSTSSPP PAAAINSSSY LSLNMMNNDE YSHVNNYSKQ QQQQQQQVVG  60
LMEKDGIQMY ESSDDMVADQ PTSSRLTDDL NMASGKSSIR KGEKKIRKPK HAFQTRSQVD  120
ILDDGYRWRK YGQKAVKNNK FPRNYYRCTY QGCNVKKQVQ RLSNDDGVVV TTYEGMHSHP  180
IEKSTDNFEH ILTQMQIYSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.17e-58WRKY family protein