PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994611.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 267aa    MW: 30726.4 Da    PI: 6.4269
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.12.1e-29143202159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs +d  vv+ tYegeHnh+
  XP_024994611.1 143 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApTCPVKKKVQRSVDDAGVVVATYEGEHNHR 202
                     58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MVATSLAIDL NLNPFPRTTH DHHTPVEVAE VQTRFYDDDG EEEEDYSFEK QVDHGMVGEL  60
SSENRKLKEM LTVIWGHNNS LQTQVKKLMQ DKELLVSNPN KRKLDETVIE QNSWNRPNED  120
NLPKTGIQRV YVRTDPSDKT LVVKDGYQWR KYGQKVTRDN PSPRAYYKCS FAPTCPVKKK  180
VQRSVDDAGV VVATYEGEHN HRSSKQEAAY ALANQHEIFS EERRSMVVPK AFDQVLVQKM  240
TDCLTKDPHF TQQLAATISS RILDFDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-52WRKY family protein