PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994625.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 300aa    MW: 33607.7 Da    PI: 9.5247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-18105155256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  XP_024994625.1 105 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYETAEAAAYAYDRAAYKLRGE 155
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MQQNNRYSFY TNNDIGSSLS NLILSGGSGS NTLDSIFTQC PSSSVTSNSP HQPLGSSVYL  60
KQRDLLQKFS EQNMGKIGKL SSTITIPTRY SGYSDYYMNP YKKKLYRGVR QRHWGKWVAE  120
IRLPQNRMRV WLGTYETAEA AAYAYDRAAY KLRGEYARLN FPNLQDSTQL GLIGDGQRLN  180
ALKSAVDAKI QAICQKVRRE KANRKNKKNK KKNDSVGSDE EREKVMKTEY SSSISCVGNE  240
LISPSMSEDG FWKGESSRCS ASGESKVAVG AVTDESEFEG CSLARLPSYD PELIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-56ERF family protein