PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994663.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 268aa    MW: 30976.4 Da    PI: 5.1246
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY893.9e-28145203259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D y+WrKYGqK+ ++++ pr+YY+C++a +C++kkkv+rs +d  v++ tYegeHnh+
  XP_024994663.1 145 KDDYQWRKYGQKVTRDNPSPRAYYKCSFApSCHAKKKVQRSVDDAGVLVATYEGEHNHK 203
                     8***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MVATWIDLNL NPTFHNTDDT PAKEDQTSRS YDDDEEDSED CSFQKEVDHD HTVGDLSGIR  60
NENRKLKEMV TIVWDNYNSL QAQVNKLMQE QEVLVSNPKK RKLDESTTRV EQSSWKRRNE  120
EELSKTGIQR VYVQTDPTDK SLVVKDDYQW RKYGQKVTRD NPSPRAYYKC SFAPSCHAKK  180
KVQRSVDDAG VLVATYEGEH NHKSRKQEAM DVLANECDPD QISTKSFFNF PKFDEVLLQQ  240
VATYLGKDRN FIVQLAAAIS SRILDLDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-56WRKY family protein